Long post ahead:
Three of my sites have been hit by G's deindexing since Big Daddy. Although I am slowly getting pages back, I still don't seem to be getting any 3rd level pages back in the index (I think I have 1). This includes full content pages plus recip linking pages.
I've heard many different reasons and warnings such as:
1. It's a temporary glitch - they will come back
2. G was "cleaning up" and the pages will get reindexed again
3. Only sites with bad linking practices got deindexed (FALSE)!
4. If you still have PR your pages will get back in
5. If you still have PR, you won't have it anymore with the next update
6. If you have a hyphenated url there was a bug that caused problems
I'm sure I've heard a few more but you get the point.
What perplexes me is the fact that I've seen long-standing, "trusted" sites with good link set-ups getting deindexed while some questionable sites have not. It doesn't seem to make sense. My pages were split up with individual state pages & I'm finding some horrible links pages on other sites that are still in the index.
It almost seems like many sites with 3rd level pages were hit during the G update. My Oak Lawn Real Estate site was just being transferred to REW during the update & the Resource pages were created after the update. Therefore, these pages did not get deindexed.
I tried an experiment with my Cook County site. I created a Resource page but instead of making it a sub-page of my Resources Directory (which would have put it 3rd level), I created it on the 2nd level with a link from my Directory, which is also on the 2nd level. IOW, I just created a new page. That brand new page has been indexed. There's very little content on it.
Do we all wait patiently to see what happens? Do we stop making 3rd level pages and if we do, does this goof up our good site navigation or do search engines really care about that?
It isn't because I'm itching to trade links but I don't like having these deindexed pages. It could ruin the links I have traded if recip partners who didn't have their pages hit start getting rid of my links. That would negate a lot of work.
I'd like other's thoughts about this.

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